Publications

[22]

Clouds in Space: Scientific Computing using Windows Azure, Steven J Johnston*, Neil S O’Brien, Hugh G Lewis, Elizabeth E Hart, Adam  White and Simon J Cox

[21]

Neil S. O’Brien, Steven J. Johnston, Elizabeth E. Hart, Kamal Djidjeli, and Simon J. Cox. Exploiting cloud computing for algorithm development. In Cyber-Enabled Distributed Computing and Knowledge Discovery (CyberC), 2011 International Conference on, pages 336 -342, Oct. 2011. [ bib | DOI ]

[20]

Tim Austin, Mark Scott, Steven Johnston, Philippa Reed, and Kenji Takeda. EP2DC- an EPrints module for linking publications and data. Ensuring long-term preservation and adding value to scientific and technical data, 2011. [ bib ]

[19]

G. Aloisio and S. Fiore, editors. Grid and Cloud Database Management, chapter Scientific computation and data management using Microsoft Azure. Springer, 2011. [ bib ]

[18]

Steven Johnston, Kenji Takeda, Hugh Lewis, Simon Cox, and Graham Swinerd. Cloud computing for planetary defense. Microsoft eScience Workshop, Pittsburgh, USA, 15 – 17 October 2009. http://eprints.soton.ac.uk/71883. [ bib ]

[17]

Steven Johnston, Simon Cox, Kenji Takeda, and Phillip Marsh. Software + services for engineers. Microsoft eScience Workshop, Indianapolis, USA, 7 – 9 December 2008. [ bib ]

[16]

Steven Johnston, Hans Fangohr, and Simon Cox. Managing large volumes of distributed scientific data. Lecture Notes in Computational Science, 1(5103):339-348, 2008. http://eprints.soton.ac.uk/43706/. [ bib ]

[15]

Steven Johnston, Richard Boardman, Hans Fangohr, and Simon Cox. BioSimGrid: Applications, performance and infrastructure. All Hands Meeting 2008, Poster, 2008. [ bib ]

[14]

Kaihsu Tai, Marc Baaden, Stuart Murdock, Bing Wu, Muan Hong Ng, Steven Johnston, Richard Boardman, Hans Fangohr, Katherine Cox, Jonathan W. Essex, and Mark S.P. Sansom. Three hydrolases and a transferase: comparative analysis of active-site dynamics via the biosimgrid database. Journal of Molecular Graphics and Modelling, 25(6):896-902, 2007. http://eprints.soton.ac.uk/44165/. [ bib ]

[13]

Muan Hong Ng, Steven Johnston, Bing Wu, Stuart Murdock, Kaihsu Tai, Hans Fangohr, Simon J. Cox, Jonathan W. Essex, Mark S. P. Sansom, and Paul Jeffreys. BioSimGrid: Grid-enabled biomolecular simulation data storage and analysis. Future Generation Computer Systems, 22:657-664, 2006. [ bib ]

[12]

Stuart E. Murdock, Kaihsu Tai, Muan Hong Ng, Steven Johnston, Bing Wu, Hans Fangohr, Charles A. Laughton, Jonathan W. Essex, and Mark S. P. Sansom. Quality assurance for biomolecular simulations. Journal of Chemical Theory and Computation, 2006. Sumbitted. [ bib ]

[11]

Christopher J. Woods, Muan Hong Ng, Steven Johnston, Stuart E. Murdock, Bing Wu, Kaihsu Tai, Hans Fangohr, Paul Jeffreys, Simon Cox, Jeremy G. Frey, Mark S. P. Sansom, and Jonathan W. Essex. Grid computing and biomolecular simulation. Philosophical Transactions: Mathematical, Physical and Engineering Sciences, 363(1833), August 2005. [ bib ]

[10]

Bing Wu, Kaihsu Tai, Muan Hong Ng, Steven Johnston, Stuart Murdock, Hans Fangohr, Mark S. P. Sansom, Jonathan Essex, Paul Jeffreys, and Simon Cox. Towards a Grid-enabled biomolecular simulation database. In Proceedings of UK e-Science All Hands Meeting 2005, pages 577-580, 2005. [ bib ]

[9]

Steven Johnston. Storage resource broker (SRB), large scientific data and Python. Europython 2005, 2005. [ bib ]

[8]

Kaihsu Tai, Stuart Murdock, Bing Wu, Muan Hong Ng, Steven Johnston, Hans Fangohr, Simon J. Cox, Paul Jeffreys, Jonathan W. Essex, and Mark S. P. Sansom. BioSimGrid: Towards a worldwide repository for biomolecular simulations. Organic & Biomolecular Chemistry, 2(22):3219-3221, 2004. http://eprints.soton.ac.uk/22974/. [ bib ]

[7]

Muan Hong Ng, Steven Johnston, Stuart Murdock, Bing Wu, Kaihsu Tai, Hans Fangohr, Simon Cox, Jonathan W. Essex, Mark Sansom, and Paul Jeffreys. Efficient data storage and analysis for generic biomolecular simulation data. In 3rd UK e-Science Programme All Hands Meeting (AHM 2004), pages 443-450. EPSRC, 2004. http://eprints.soton.ac.uk/23166/. [ bib ]

[6]

Bing Wu, Matthew Dovey, Kaihsu Tai, Muan Hong Ng, Stuart Murdock, Hans Fangohr, Steven Johnston, Paul Jeffreys, Simon Cox, Jonathan W. Essex, and Mark S.P. Sansom. Security and biosimgrid: a biomolecular simulation database. Technical Report YCS-2004-380, University of York, Department of Computer Science, 2004. Also read at: Workshop on Grid Security Practice and Experience (UK e-Science Security Task Force) Oxford, UK, 8-9 July 2004, http://eprints.soton.ac.uk/23168/. [ bib ]

[5]

Bing Wu, Matthew Dovey, Muan Hong Ng, Kaihsu Tai, Stuart Murdock, Hans Fangohr, Steven Johnston, Paul Jeffreys, Simon Cox, Jonathan Essex, and Mark S. P. Sansom. A web / Grid portal implementation of BioSimGrid: A biomolecular simulation database. Journal of Digital Information Management, 2(2):74-78, 2004. http://eprints.soton.ac.uk/22809/. [ bib ]

[4]

Stuart Murdock, Muan Hong Ng, Steven Johnston, Hans Fangohr, and Jon Essex. Comparing the performance of a database, specific binary files and netCDF for data retrieval, 2004. www.biosimgrid.org. [ bib ]

[3]

Bing Wu, Kaihsu Tai, Stuart Murdock, Muan Hong Ng, Steven Johnston, Hans Fangohr, Paul Jeffreys, Simon Cox, Jonathan Essex, and Mark S.P. Sansom. BioSimGrid: A distributed database for biomolecular simulations. Abstracts of Papers of the American Chemical Society, page 682, 2004. http://eprints.soton.ac.uk/20193/. [ bib ]

[2]

Z. Jiao, J. Wason, M. Molinari, S. Johnston, and S.J. Cox. Integrating data management into engineering applications,. Proceedings of UK e-Science All Hands Meeting, Nottingham, UK, pages 687 – 694, September 2003. [ bib ]

[1]

Yalini Arinaminpathy, Oliver Beckstein, Philip Biggin, Peter Bond, Carmen Domene, Andrew Pang, and Mark Sansom. Large scale biomolecular simulations: Current status and future prospects. Proceedings of UK e-Science All Hands Meeting, 2003. http://eprints.soton.ac.uk/65067/. [ bib ]

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